DenseLongMatrix1D (Parallel Colt 0.10.1

java.lang.Object
- cern.colt.PersistentObject
- - cern.colt.matrix.AbstractMatrix
  - - cern.colt.matrix.AbstractMatrix1D
    - - cern.colt.matrix.tlong.LongMatrix1D
      - cern.colt.matrix.tlong.impl.DenseLongMatrix1D

All Implemented Interfaces:

Serializable, Cloneable
```
public class DenseLongMatrix1D
extends LongMatrix1D
```
Dense 1-d matrix (aka vector) holding int elements. First see the package summary and javadoc tree view to get the broad picture.
Implementation:
Longernally holds one single contigous one-dimensional array. Note that this implementation is not synchronized.
Memory requirements:
memory [bytes] = 8*size(). Thus, a 1000000 matrix uses 8 MB.
Time complexity:
O(1) (i.e. constant time) for the basic operations get, getQuick, set, setQuick and size,

Version:

1.0, 09/24/99

Author:

wolfgang.hoschek@cern.ch, Piotr Wendykier (piotr.wendykier@gmail.com)

See Also:
Serialized Form

Constructor Summary

Constructors
Constructor and Description
`DenseLongMatrix1D(int size)` Constructs a matrix with a given number of cells.
`DenseLongMatrix1D(int size, long[] elements, int zero, int stride, boolean isView)` Constructs a matrix with the given parameters.
`DenseLongMatrix1D(long[] values)` Constructs a matrix with a copy of the given values.

Method Summary

Methods
Modifier and Type	Method and Description
`long`	`aggregate(LongLongFunction aggr, LongFunction f)` Applies a function to each cell and aggregates the results.
`long`	`aggregate(LongLongFunction aggr, LongFunction f, IntArrayList indexList)` Applies a function to all cells with a given indexes and aggregates the results.
`long`	`aggregate(LongMatrix1D other, LongLongFunction aggr, LongLongFunction f)` Applies a function to each corresponding cell of two matrices and aggregates the results.
`LongMatrix1D`	`assign(int[] values)` Sets all cells to the state specified by `values`.
`LongMatrix1D`	`assign(long value)` Sets all cells to the state specified by `value`.
`LongMatrix1D`	`assign(long[] values)` Sets all cells to the state specified by `values`.
`LongMatrix1D`	`assign(LongFunction function)` Assigns the result of a function to each cell; `x[i] = function(x[i])`.
`LongMatrix1D`	`assign(LongMatrix1D source)` Replaces all cell values of the receiver with the values of another matrix.
`LongMatrix1D`	`assign(LongMatrix1D y, LongLongFunction function)` Assigns the result of a function to each cell; `x[i] = function(x[i],y[i])`.
`LongMatrix1D`	`assign(LongProcedure cond, long value)` Assigns a value to all cells that satisfy a condition.
`LongMatrix1D`	`assign(LongProcedure cond, LongFunction function)` Assigns the result of a function to all cells that satisfy a condition.
`int`	`cardinality()` Returns the number of cells having non-zero values; ignores tolerance.
`long[]`	`elements()` Returns the elements of this matrix.
`long[]`	`getMaxLocation()` Return the maximum value of this matrix together with its location
`long[]`	`getMinLocation()` Return the minimum value of this matrix together with its location
`void`	`getNegativeValues(LongArrayList indexList, LongArrayList valueList)`
`void`	`getNonZeros(LongArrayList indexList, LongArrayList valueList)`
`void`	`getPositiveValues(LongArrayList indexList, LongArrayList valueList)`
`long`	`getQuick(int index)` Returns the matrix cell value at coordinate `index`.
`long`	`index(int rank)` Returns the position of the element with the given relative rank within the (virtual or non-virtual) internal 1-dimensional array.
`LongMatrix1D`	`like(int size)` Construct and returns a new empty matrix of the same dynamic type as the receiver, having the specified size.
`LongMatrix2D`	`like2D(int rows, int columns)` Construct and returns a new 2-d matrix of the corresponding dynamic type, entirelly independent of the receiver.
`LongMatrix2D`	`reshape(int rows, int columns)` Returns new LongMatrix2D of size rows x columns whose elements are taken column-wise from this matrix.
`LongMatrix3D`	`reshape(int slices, int rows, int columns)` Returns new LongMatrix3D of size slices x rows x columns, whose elements are taken column-wise from this matrix.
`void`	`setQuick(int index, long value)` Sets the matrix cell at coordinate `index` to the specified value.
`void`	`swap(LongMatrix1D other)` Swaps each element `this[i]` with `other[i]`.
`void`	`toArray(long[] values)` Fills the cell values into the specified 1-dimensional array.
`long`	`zDotProduct(LongMatrix1D y)` Returns the dot product of two vectors x and y, which is `Sum(x[i]*y[i])`.
`long`	`zDotProduct(LongMatrix1D y, int from, int length)` Returns the dot product of two vectors x and y, which is `Sum(x[i]*y[i])`.
`long`	`zSum()` Returns the sum of all cells; `Sum( x[i] )`.

Methods inherited from class cern.colt.matrix.tlong.LongMatrix1D
assign, copy, equals, equals, get, getNegativeValues, getNonZeros, getNonZeros, getPositiveValues, like, set, setSize, toArray, toString, viewFlip, viewPart, viewSelection, viewSelection, viewSorted, viewStrides, zDotProduct

Methods inherited from class cern.colt.matrix.AbstractMatrix1D
checkSize, size, stride, toStringShort

Methods inherited from class cern.colt.matrix.AbstractMatrix
ensureCapacity, isView, trimToSize

Methods inherited from class cern.colt.PersistentObject
clone

Methods inherited from class java.lang.Object
getClass, hashCode, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - DenseLongMatrix1D
```
public DenseLongMatrix1D(long[] values)
```
    Constructs a matrix with a copy of the given values. The values are copied. So subsequent changes in values are not reflected in the matrix, and vice-versa.
    
    Parameters:
    values - The values to be filled into the new matrix.
  - DenseLongMatrix1D
```
public DenseLongMatrix1D(int size)
```
    Constructs a matrix with a given number of cells. All entries are initially 0.
    
    Parameters:
    size - the number of cells the matrix shall have.
    
    Throws:
    
    IllegalArgumentException - if size<0.
  - DenseLongMatrix1D
```
public DenseLongMatrix1D(int size,
                 long[] elements,
                 int zero,
                 int stride,
                 boolean isView)
```
    Constructs a matrix with the given parameters.
    
    Parameters:
    size - the number of cells the matrix shall have.
    elements - the cells.
    zero - the index of the first element.
    stride - the number of indexes between any two elements, i.e. index(i+1)-index(i).
    isView - if true then a matrix view is constructed
    
    Throws:
    
    IllegalArgumentException - if size<0.
- Method Detail
  - aggregate
```
public long aggregate(LongLongFunction aggr,
             LongFunction f)
```
    Description copied from class: LongMatrix1D
    Applies a function to each cell and aggregates the results. Returns a value v such that v==a(size()) where a(i) == aggr( a(i-1), f(get(i)) ) and terminators are a(1) == f(get(0)), a(0)==Long.NaN.
    Example:
```
   cern.jet.math.Functions F = cern.jet.math.Functions.functions;
   matrix = 0 1 2 3 
 
   // Sum( x[i]*x[i] ) 
   matrix.aggregate(F.plus,F.square);
   --> 14
 
 
```
    For further examples, see the package doc.
    Overrides:
    
    aggregate in class LongMatrix1D
    
    Parameters:
    aggr - an aggregation function taking as first argument the current aggregation and as second argument the transformed current cell value.
    f - a function transforming the current cell value.
    
    Returns:
    the aggregated measure.
    See Also:
    LongFunctions
  - aggregate
```
public long aggregate(LongLongFunction aggr,
             LongFunction f,
             IntArrayList indexList)
```
    Description copied from class: LongMatrix1D
    
    Applies a function to all cells with a given indexes and aggregates the results.
    
    Overrides:
    
    aggregate in class LongMatrix1D
    
    Parameters:
    aggr - an aggregation function taking as first argument the current aggregation and as second argument the transformed current cell value.
    f - a function transforming the current cell value.
    indexList - indexes.
    
    Returns:
    the aggregated measure.
    See Also:
    LongFunctions
  - aggregate
```
public long aggregate(LongMatrix1D other,
             LongLongFunction aggr,
             LongLongFunction f)
```
    Description copied from class: LongMatrix1D
    Applies a function to each corresponding cell of two matrices and aggregates the results. Returns a value v such that v==a(size()) where a(i) == aggr( a(i-1), f(get(i),other.get(i)) ) and terminators are a(1) == f(get(0),other.get(0)), a(0)==Long.NaN.
    Example:
```
   cern.jet.math.Functions F = cern.jet.math.Functions.functions;
   x = 0 1 2 3 
   y = 0 1 2 3 
 
   // Sum( x[i]*y[i] )
   x.aggregate(y, F.plus, F.mult);
   --> 14
 
   // Sum( (x[i]+y[i])ˆ2 )
   x.aggregate(y, F.plus, F.chain(F.square,F.plus));
   --> 56
 
 
```
    For further examples, see the package doc.
    Overrides:
    
    aggregate in class LongMatrix1D
    
    aggr - an aggregation function taking as first argument the current aggregation and as second argument the transformed current cell values.
    f - a function transforming the current cell values.
    
    Returns:
    the aggregated measure.
    See Also:
    LongFunctions
  - assign
```
public LongMatrix1D assign(LongFunction function)
```
    Description copied from class: LongMatrix1D
    Assigns the result of a function to each cell; x[i] = function(x[i]). (Iterates downwards from [size()-1] to [0]).
    Example:
```
   // change each cell to its sine
   matrix =   0.5      1.5      2.5       3.5 
   matrix.assign(cern.jet.math.Functions.sin);
   -->
   matrix ==  0.479426 0.997495 0.598472 -0.350783
 
 
```
    For further examples, see the package doc.
    Overrides:
    
    assign in class LongMatrix1D
    
    Parameters:
    function - a function object taking as argument the current cell's value.
    
    Returns:
    this (for convenience only).
    See Also:
    LongFunctions
  - assign
```
public LongMatrix1D assign(LongProcedure cond,
                  LongFunction function)
```
    Description copied from class: LongMatrix1D
    
    Assigns the result of a function to all cells that satisfy a condition.
    
    Overrides:
    
    assign in class LongMatrix1D
    
    Parameters:
    cond - a condition.
    function - a function object.
    
    Returns:
    this (for convenience only).
    See Also:
    LongFunctions
  - assign
```
public LongMatrix1D assign(LongProcedure cond,
                  long value)
```
    Description copied from class: LongMatrix1D
    
    Assigns a value to all cells that satisfy a condition.
    
    Overrides:
    
    assign in class LongMatrix1D
    
    Parameters:
    cond - a condition.
    value - a value.
    
    Returns:
    this (for convenience only).
  - assign
```
public LongMatrix1D assign(long value)
```
    Description copied from class: LongMatrix1D
    
    Sets all cells to the state specified by value.
    
    Overrides:
    
    assign in class LongMatrix1D
    
    Parameters:
    value - the value to be filled into the cells.
    
    Returns:
    this (for convenience only).
  - assign
```
public LongMatrix1D assign(long[] values)
```
    Description copied from class: LongMatrix1D
    
    Sets all cells to the state specified by values. values is required to have the same number of cells as the receiver.
    The values are copied. So subsequent changes in values are not reflected in the matrix, and vice-versa.
    
    Overrides:
    
    assign in class LongMatrix1D
    
    Parameters:
    values - the values to be filled into the cells.
    
    Returns:
    this (for convenience only).
  - assign
```
public LongMatrix1D assign(int[] values)
```
    Description copied from class: LongMatrix1D
    
    Sets all cells to the state specified by values. values is required to have the same number of cells as the receiver.
    The values are copied. So subsequent changes in values are not reflected in the matrix, and vice-versa.
    
    Overrides:
    
    assign in class LongMatrix1D
    
    Parameters:
    values - the values to be filled into the cells.
    
    Returns:
    this (for convenience only).
  - assign
```
public LongMatrix1D assign(LongMatrix1D source)
```
    Description copied from class: LongMatrix1D
    
    Replaces all cell values of the receiver with the values of another matrix. Both matrices must have the same size. If both matrices share the same cells (as is the case if they are views derived from the same matrix) and intersect in an ambiguous way, then replaces as if using an intermediate auxiliary deep copy of other.
    
    Overrides:
    
    assign in class LongMatrix1D
    
    Parameters:
    source - the source matrix to copy from (may be identical to the receiver).
    
    Returns:
    this (for convenience only).
  - assign
```
public LongMatrix1D assign(LongMatrix1D y,
                  LongLongFunction function)
```
    Description copied from class: LongMatrix1D
    Assigns the result of a function to each cell; x[i] = function(x[i],y[i]).
    Example:
```
   // assign x[i] = x[i]<sup>y[i]</sup>
   m1 = 0 1 2 3;
   m2 = 0 2 4 6;
   m1.assign(m2, cern.jet.math.Functions.pow);
   -->
   m1 == 1 1 16 729
 
 
```
    For further examples, see the package doc.
    Overrides:
    
    assign in class LongMatrix1D
    
    Parameters:
    y - the secondary matrix to operate on.
    function - a function object taking as first argument the current cell's value of this, and as second argument the current cell's value of y,
    
    Returns:
    this (for convenience only).
    See Also:
    LongFunctions
  - cardinality
```
public int cardinality()
```
    Description copied from class: LongMatrix1D
    
    Returns the number of cells having non-zero values; ignores tolerance.
    
    Overrides:
    
    cardinality in class LongMatrix1D
    
    Returns:
    the number of cells having non-zero values.
  - elements
```
public long[] elements()
```
    Description copied from class: LongMatrix1D
    
    Returns the elements of this matrix.
    
    Specified by:
    
    elements in class LongMatrix1D
    
    Returns:
    the elements
  - getNonZeros
```
public void getNonZeros(LongArrayList indexList,
               LongArrayList valueList)
```
  - getPositiveValues
```
public void getPositiveValues(LongArrayList indexList,
                     LongArrayList valueList)
```
  - getNegativeValues
```
public void getNegativeValues(LongArrayList indexList,
                     LongArrayList valueList)
```
  - getMaxLocation
```
public long[] getMaxLocation()
```
    Description copied from class: LongMatrix1D
    
    Return the maximum value of this matrix together with its location
    
    Overrides:
    
    getMaxLocation in class LongMatrix1D
    
    Returns:
    { maximum_value, location };
  - getMinLocation
```
public long[] getMinLocation()
```
    Description copied from class: LongMatrix1D
    
    Return the minimum value of this matrix together with its location
    
    Overrides:
    
    getMinLocation in class LongMatrix1D
    
    Returns:
    { minimum_value, location };
  - getQuick
```
public long getQuick(int index)
```
    Description copied from class: LongMatrix1D
    
    Returns the matrix cell value at coordinate index.
    Provided with invalid parameters this method may return invalid objects without throwing any exception. You should only use this method when you are absolutely sure that the coordinate is within bounds. Precondition (unchecked): index<0 || index>=size().
    
    Specified by:
    
    getQuick in class LongMatrix1D
    
    Parameters:
    index - the index of the cell.
    
    Returns:
    the value of the specified cell.
  - like
```
public LongMatrix1D like(int size)
```
    Description copied from class: LongMatrix1D
    
    Construct and returns a new empty matrix of the same dynamic type as the receiver, having the specified size. For example, if the receiver is an instance of type DenseLongMatrix1D the new matrix must also be of type DenseLongMatrix1D, if the receiver is an instance of type SparseLongMatrix1D the new matrix must also be of type SparseLongMatrix1D, etc. In general, the new matrix should have internal parametrization as similar as possible.
    
    Specified by:
    
    like in class LongMatrix1D
    
    Parameters:
    size - the number of cell the matrix shall have.
    
    Returns:
    a new empty matrix of the same dynamic type.
  - like2D
```
public LongMatrix2D like2D(int rows,
                  int columns)
```
    Description copied from class: LongMatrix1D
    
    Construct and returns a new 2-d matrix of the corresponding dynamic type, entirelly independent of the receiver. For example, if the receiver is an instance of type DenseLongMatrix1D the new matrix must be of type DenseLongMatrix2D, if the receiver is an instance of type SparseLongMatrix1D the new matrix must be of type SparseLongMatrix2D, etc.
    
    Specified by:
    
    like2D in class LongMatrix1D
    
    Parameters:
    rows - the number of rows the matrix shall have.
    columns - the number of columns the matrix shall have.
    
    Returns:
    a new matrix of the corresponding dynamic type.
  - reshape
```
public LongMatrix2D reshape(int rows,
                   int columns)
```
    Description copied from class: LongMatrix1D
    
    Returns new LongMatrix2D of size rows x columns whose elements are taken column-wise from this matrix.
    
    Specified by:
    
    reshape in class LongMatrix1D
    
    Parameters:
    rows - number of rows
    columns - number of columns
    
    Returns:
    new 2D matrix with columns being the elements of this matrix.
  - reshape
```
public LongMatrix3D reshape(int slices,
                   int rows,
                   int columns)
```
    Description copied from class: LongMatrix1D
    
    Returns new LongMatrix3D of size slices x rows x columns, whose elements are taken column-wise from this matrix.
    
    Specified by:
    
    reshape in class LongMatrix1D
    
    rows - number of rows
    columns - number of columns
    
    Returns:
    new 2D matrix with columns being the elements of this matrix.
  - setQuick
```
public void setQuick(int index,
            long value)
```
    Description copied from class: LongMatrix1D
    
    Sets the matrix cell at coordinate index to the specified value.
    Provided with invalid parameters this method may access illegal indexes without throwing any exception. You should only use this method when you are absolutely sure that the coordinate is within bounds. Precondition (unchecked): index<0 || index>=size().
    
    Specified by:
    
    setQuick in class LongMatrix1D
    
    Parameters:
    index - the index of the cell.
    value - the value to be filled into the specified cell.
  - swap
```
public void swap(LongMatrix1D other)
```
    Description copied from class: LongMatrix1D
    
    Swaps each element this[i] with other[i].
    
    Overrides:
    
    swap in class LongMatrix1D
  - toArray
```
public void toArray(long[] values)
```
    Description copied from class: LongMatrix1D
    
    Fills the cell values into the specified 1-dimensional array. The values are copied. So subsequent changes in values are not reflected in the matrix, and vice-versa. After this call returns the array values has the form
    for (int i=0; i < size(); i++) values[i] = get(i);
    
    Overrides:
    
    toArray in class LongMatrix1D
  - zDotProduct
```
public long zDotProduct(LongMatrix1D y)
```
    Description copied from class: LongMatrix1D
    
    Returns the dot product of two vectors x and y, which is Sum(x[i]*y[i]). Where x == this. Operates on cells at indexes 0 .. Math.min(size(),y.size()).
    
    Overrides:
    
    zDotProduct in class LongMatrix1D
    
    Parameters:
    y - the second vector.
    
    Returns:
    the sum of products.
  - zDotProduct
```
public long zDotProduct(LongMatrix1D y,
               int from,
               int length)
```
    Description copied from class: LongMatrix1D
    
    Returns the dot product of two vectors x and y, which is Sum(x[i]*y[i]). Where x == this. Operates on cells at indexes from .. Min(size(),y.size(),from+length)-1.
    
    Overrides:
    
    zDotProduct in class LongMatrix1D
    
    Parameters:
    y - the second vector.
    from - the first index to be considered.
    length - the number of cells to be considered.
    
    Returns:
    the sum of products; zero if from<0 || length<0.
  - zSum
```
public long zSum()
```
    Description copied from class: LongMatrix1D
    
    Returns the sum of all cells; Sum( x[i] ).
    
    Overrides:
    
    zSum in class LongMatrix1D
    
    Returns:
    the sum.
  - index
```
public long index(int rank)
```
    Description copied from class: AbstractMatrix1D
    
    Returns the position of the element with the given relative rank within the (virtual or non-virtual) internal 1-dimensional array. You may want to override this method for performance.
    
    Overrides:
    
    index in class AbstractMatrix1D
    
    Parameters:
    rank - the rank of the element.

Class DenseLongMatrix1D

Constructor Summary

Method Summary

Methods inherited from class cern.colt.matrix.tlong.LongMatrix1D

Methods inherited from class cern.colt.matrix.AbstractMatrix1D

Methods inherited from class cern.colt.matrix.AbstractMatrix

Methods inherited from class cern.colt.PersistentObject

Methods inherited from class java.lang.Object

Constructor Detail

DenseLongMatrix1D

DenseLongMatrix1D

DenseLongMatrix1D

Method Detail

aggregate

aggregate

aggregate

assign

assign

assign

assign

assign

assign

assign

assign

cardinality

elements

getNonZeros

getPositiveValues

getNegativeValues

getMaxLocation

getMinLocation

getQuick

like

like2D

reshape

reshape

setQuick

swap

toArray

zDotProduct

zDotProduct

zSum

index