SparseRCObjectMatrix2D (Parallel Colt 0.10.1

java.lang.Object
- cern.colt.PersistentObject
- - cern.colt.matrix.AbstractMatrix
  - - cern.colt.matrix.AbstractMatrix2D
    - - cern.colt.matrix.tobject.ObjectMatrix2D
      - cern.colt.matrix.tobject.impl.WrapperObjectMatrix2D
        
        cern.colt.matrix.tobject.impl.SparseRCObjectMatrix2D

All Implemented Interfaces:

Serializable, Cloneable
```
public class SparseRCObjectMatrix2D
extends WrapperObjectMatrix2D
```
Sparse row-compressed 2-d matrix holding Object elements. First see the package summary and javadoc tree view to get the broad picture.
Implementation:
Internally uses the standard sparse row-compressed format
Note that this implementation is not synchronized.
Memory requirements:
Cells that
- are never set to non-zero values do not use any memory.
- switch from zero to non-zero state do use memory.
- switch back from non-zero to zero state also do use memory. Their memory is not automatically reclaimed (because of the lists vs. arrays). Reclamation can be triggered via trimToSize().
Author:

Piotr Wendykier (piotr.wendykier@gmail.com)

See Also:
Serialized Form

Constructor Summary

Constructors
Constructor and Description
`SparseRCObjectMatrix2D(int rows, int columns)` Constructs a matrix with a given number of rows and columns.
`SparseRCObjectMatrix2D(int rows, int columns, int nzmax)` Constructs a matrix with a given number of rows and columns.
`SparseRCObjectMatrix2D(int rows, int columns, int[] rowPointers, int[] columnIndexes, Object[] values)` Constructs a matrix with given parameters.
`SparseRCObjectMatrix2D(int rows, int columns, int[] rowIndexes, int[] columnIndexes, Object[] values, boolean removeZeroes, boolean sortColumnIndexes)` Constructs a matrix with indexes and values given in the coordinate format.
`SparseRCObjectMatrix2D(int rows, int columns, int[] rowIndexes, int[] columnIndexes, Object value, boolean sortColumnIndexes)` Constructs a matrix with indexes given in the coordinate format and single value.
`SparseRCObjectMatrix2D(Object[][] values)` Constructs a matrix with a copy of the given values.

Method Summary

Methods
Modifier and Type	Method and Description
`ObjectMatrix2D`	`assign(Object value)` Sets all cells to the state specified by `value`.
`ObjectMatrix2D`	`assign(ObjectFunction function)` Assigns the result of a function to each cell; `x[row,col] = function(x[row,col])`.
`ObjectMatrix2D`	`assign(ObjectMatrix2D source)` Replaces all cell values of the receiver with the values of another matrix.
`int`	`cardinality()` Returns the number of cells having non-zero values; ignores tolerance.
`ObjectMatrix2D`	`forEachNonZero(IntIntObjectFunction function)` Assigns the result of a function to each non-zero cell; `x[row,col] = function(x[row,col])`.
`SparseCCObjectMatrix2D`	`getColumnCompressed()` Returns a new matrix that has the same elements as this matrix, but is in a column-compressed form.
`int[]`	`getColumnIndexes()` Returns column indexes
`DenseObjectMatrix2D`	`getDense()` Returns a new matrix that has the same elements as this matrix, but is in a dense form.
`Object`	`getQuick(int row, int column)` Returns the matrix cell value at coordinate `[row,column]`.
`int[]`	`getRowPointers()` Returns row pointers
`SparseRCObjectMatrix2D`	`getTranspose()` Returns a new matrix that is the transpose of this matrix.
`Object[]`	`getValues()` Returns numerical values
`boolean`	`hasColumnIndexesSorted()` Returns true if column indexes are sorted, false otherwise
`ObjectMatrix2D`	`like(int rows, int columns)` Construct and returns a new empty matrix of the same dynamic type as the receiver, having the specified number of rows and columns.
`ObjectMatrix1D`	`like1D(int size)` Construct and returns a new 1-d matrix of the corresponding dynamic type, entirelly independent of the receiver.
`void`	`removeZeroes()` Removes zero entries (if any)
`void`	`setQuick(int row, int column, Object value)` Sets the matrix cell at coordinate `[row,column]` to the specified value.
`void`	`sortColumnIndexes()` Sorts column indexes
`String`	`toString()` Returns a string representation using default formatting.
`void`	`trimToSize()` Releases any superfluous internal memory.

Methods inherited from class cern.colt.matrix.tobject.impl.WrapperObjectMatrix2D
assign, assign, assign, elements, equals, vectorize, viewColumn, viewColumnFlip, viewDice, viewPart, viewRow, viewRowFlip, viewSelection, viewStrides

Methods inherited from class cern.colt.matrix.tobject.ObjectMatrix2D
aggregate, aggregate, aggregate, aggregate, assign, assign, assign, assign, copy, equals, get, getNonZeros, like, set, toArray, viewSelection, viewSorted

Methods inherited from class cern.colt.matrix.AbstractMatrix2D
checkShape, checkShape, columns, columnStride, index, rows, rowStride, size, toStringShort

Methods inherited from class cern.colt.matrix.AbstractMatrix
ensureCapacity, isView

Methods inherited from class cern.colt.PersistentObject
clone

Methods inherited from class java.lang.Object
getClass, hashCode, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - SparseRCObjectMatrix2D
```
public SparseRCObjectMatrix2D(Object[][] values)
```
    Constructs a matrix with a copy of the given values. values is required to have the form values[row][column] and have exactly the same number of columns in every row.
    The values are copied. So subsequent changes in values are not reflected in the matrix, and vice-versa.
    
    Parameters:
    values - The values to be filled into the new matrix.
    
    Throws:
    
    IllegalArgumentException - if for any 1 <= row < values.length: values[row].length != values[row-1].length .
  - SparseRCObjectMatrix2D
```
public SparseRCObjectMatrix2D(int rows,
                      int columns)
```
    Constructs a matrix with a given number of rows and columns. All entries are initially 0.
    
    Parameters:
    rows - the number of rows the matrix shall have.
    columns - the number of columns the matrix shall have.
    
    Throws:
    
    IllegalArgumentException - if rows<0 || columns<0 || (double)columns*rows > Integer.MAX_VALUE .
  - SparseRCObjectMatrix2D
```
public SparseRCObjectMatrix2D(int rows,
                      int columns,
                      int nzmax)
```
    Constructs a matrix with a given number of rows and columns. All entries are initially 0.
    
    Parameters:
    rows - the number of rows the matrix shall have.
    columns - the number of columns the matrix shall have.
    nzmax - maximum number of nonzero elements
    
    Throws:
    
    IllegalArgumentException - if rows<0 || columns<0 || (double)columns*rows > Integer.MAX_VALUE .
  - SparseRCObjectMatrix2D
```
public SparseRCObjectMatrix2D(int rows,
                      int columns,
                      int[] rowIndexes,
                      int[] columnIndexes,
                      Object value,
                      boolean sortColumnIndexes)
```
    Constructs a matrix with indexes given in the coordinate format and single value.
    
    Parameters:
    rows - the number of rows the matrix shall have.
    columns - the number of columns the matrix shall have.
    rowIndexes - row indexes
    columnIndexes - column indexes
    value - numerical value, cannot be zero
    sortColumnIndexes - if true, then column indexes are sorted
  - SparseRCObjectMatrix2D
```
public SparseRCObjectMatrix2D(int rows,
                      int columns,
                      int[] rowIndexes,
                      int[] columnIndexes,
                      Object[] values,
                      boolean removeZeroes,
                      boolean sortColumnIndexes)
```
    Constructs a matrix with indexes and values given in the coordinate format.
    
    Parameters:
    rows - the number of rows the matrix shall have.
    columns - the number of columns the matrix shall have.
    rowIndexes - row indexes
    columnIndexes - column indexes
    values - numerical values
    removeZeroes - if true, then zeroes (if any) are removed
    sortColumnIndexes - if true, then column indexes are sorted
  - SparseRCObjectMatrix2D
```
public SparseRCObjectMatrix2D(int rows,
                      int columns,
                      int[] rowPointers,
                      int[] columnIndexes,
                      Object[] values)
```
    Constructs a matrix with given parameters. The arrays are not copied.
    
    Parameters:
    rows - the number of rows the matrix shall have.
    columns - the number of columns the matrix shall have.
    rowPointers - row pointers
    columnIndexes - column indexes
    values - numerical values
- Method Detail
  - assign
```
public ObjectMatrix2D assign(ObjectFunction function)
```
    Description copied from class: ObjectMatrix2D
    Assigns the result of a function to each cell; x[row,col] = function(x[row,col]).
    Example:
```
         matrix = 2 x 2 matrix 
         0.5 1.5      
         2.5 3.5
 
         // change each cell to its sine
         matrix.assign(cern.jet.math.Functions.sin);
         -->
         2 x 2 matrix
         0.479426  0.997495 
         0.598472 -0.350783
 
 
```
    For further examples, see the package doc.
    Overrides:
    
    assign in class ObjectMatrix2D
    
    Parameters:
    function - a function object taking as argument the current cell's value.
    
    Returns:
    this (for convenience only).
    See Also:
    DoubleFunctions
  - assign
```
public ObjectMatrix2D assign(Object value)
```
    Description copied from class: ObjectMatrix2D
    
    Sets all cells to the state specified by value.
    
    Overrides:
    
    assign in class ObjectMatrix2D
    
    Parameters:
    value - the value to be filled into the cells.
    
    Returns:
    this (for convenience only).
  - assign
```
public ObjectMatrix2D assign(ObjectMatrix2D source)
```
    Description copied from class: ObjectMatrix2D
    
    Replaces all cell values of the receiver with the values of another matrix. Both matrices must have the same number of rows and columns. If both matrices share the same cells (as is the case if they are views derived from the same matrix) and intersect in an ambiguous way, then replaces as if using an intermediate auxiliary deep copy of other.
    
    Overrides:
    
    assign in class ObjectMatrix2D
    
    Parameters:
    source - the source matrix to copy from (may be identical to the receiver).
    
    Returns:
    this (for convenience only).
  - cardinality
```
public int cardinality()
```
    Description copied from class: ObjectMatrix2D
    
    Returns the number of cells having non-zero values; ignores tolerance.
    
    Overrides:
    
    cardinality in class ObjectMatrix2D
  - forEachNonZero
```
public ObjectMatrix2D forEachNonZero(IntIntObjectFunction function)
```
    Description copied from class: ObjectMatrix2D
    
    Assigns the result of a function to each non-zero cell; x[row,col] = function(x[row,col]). Use this method for fast special-purpose iteration. If you want to modify another matrix instead of this (i.e. work in read-only mode), simply return the input value unchanged. Parameters to function are as follows: first==row, second==column, third==nonZeroValue.
    
    Overrides:
    
    forEachNonZero in class ObjectMatrix2D
    
    Parameters:
    function - a function object taking as argument the current non-zero cell's row, column and value.
    
    Returns:
    this (for convenience only).
  - getColumnCompressed
```
public SparseCCObjectMatrix2D getColumnCompressed()
```
    Returns a new matrix that has the same elements as this matrix, but is in a column-compressed form. This method creates a new object (not a view), so changes in the returned matrix are NOT reflected in this matrix.
    
    Returns:
    this matrix in a column-compressed form
  - getColumnIndexes
```
public int[] getColumnIndexes()
```
    Returns column indexes
    
    Returns:
    column indexes
  - getDense
```
public DenseObjectMatrix2D getDense()
```
    Returns a new matrix that has the same elements as this matrix, but is in a dense form. This method creates a new object (not a view), so changes in the returned matrix are NOT reflected in this matrix.
    
    Returns:
    this matrix in a dense form
  - getQuick
```
public Object getQuick(int row,
              int column)
```
    Description copied from class: ObjectMatrix2D
    
    Returns the matrix cell value at coordinate [row,column].
    Provided with invalid parameters this method may return invalid objects without throwing any exception. You should only use this method when you are absolutely sure that the coordinate is within bounds. Precondition (unchecked): 0 <= column < columns() && 0 <= row < rows().
    
    Overrides:
    
    getQuick in class WrapperObjectMatrix2D
    
    Parameters:
    row - the index of the row-coordinate.
    column - the index of the column-coordinate.
    
    Returns:
    the value at the specified coordinate.
  - getRowPointers
```
public int[] getRowPointers()
```
    Returns row pointers
    
    Returns:
    row pointers
  - getTranspose
```
public SparseRCObjectMatrix2D getTranspose()
```
    Returns a new matrix that is the transpose of this matrix. This method creates a new object (not a view), so changes in the returned matrix are NOT reflected in this matrix.
    
    Returns:
    the transpose of this matrix
  - getValues
```
public Object[] getValues()
```
    Returns numerical values
    
    Returns:
    numerical values
  - hasColumnIndexesSorted
```
public boolean hasColumnIndexesSorted()
```
    Returns true if column indexes are sorted, false otherwise
    
    Returns:
    true if column indexes are sorted, false otherwise
  - like
```
public ObjectMatrix2D like(int rows,
                  int columns)
```
    Description copied from class: ObjectMatrix2D
    
    Construct and returns a new empty matrix of the same dynamic type as the receiver, having the specified number of rows and columns. For example, if the receiver is an instance of type DenseObjectMatrix2D the new matrix must also be of type DenseObjectMatrix2D, if the receiver is an instance of type SparseObjectMatrix2D the new matrix must also be of type SparseObjectMatrix2D, etc. In general, the new matrix should have internal parametrization as similar as possible.
    
    Overrides:
    
    like in class WrapperObjectMatrix2D
    
    Parameters:
    rows - the number of rows the matrix shall have.
    columns - the number of columns the matrix shall have.
    
    Returns:
    a new empty matrix of the same dynamic type.
  - like1D
```
public ObjectMatrix1D like1D(int size)
```
    Description copied from class: ObjectMatrix2D
    
    Construct and returns a new 1-d matrix of the corresponding dynamic type, entirelly independent of the receiver. For example, if the receiver is an instance of type DenseObjectMatrix2D the new matrix must be of type DenseObjectMatrix1D, if the receiver is an instance of type SparseObjectMatrix2D the new matrix must be of type SparseObjectMatrix1D, etc.
    
    Overrides:
    
    like1D in class WrapperObjectMatrix2D
    
    Parameters:
    size - the number of cells the matrix shall have.
    
    Returns:
    a new matrix of the corresponding dynamic type.
  - removeZeroes
```
public void removeZeroes()
```
    Removes zero entries (if any)
  - setQuick
```
public void setQuick(int row,
            int column,
            Object value)
```
    Description copied from class: ObjectMatrix2D
    
    Sets the matrix cell at coordinate [row,column] to the specified value.
    Provided with invalid parameters this method may access illegal indexes without throwing any exception. You should only use this method when you are absolutely sure that the coordinate is within bounds. Precondition (unchecked): 0 <= column < columns() && 0 <= row < rows().
    
    Overrides:
    
    setQuick in class WrapperObjectMatrix2D
    
    Parameters:
    row - the index of the row-coordinate.
    column - the index of the column-coordinate.
    value - the value to be filled into the specified cell.
  - sortColumnIndexes
```
public void sortColumnIndexes()
```
    Sorts column indexes
  - toString
```
public String toString()
```
    Description copied from class: ObjectMatrix2D
    
    Returns a string representation using default formatting.
    
    Overrides:
    
    toString in class ObjectMatrix2D
    
    See Also:
    ObjectFormatter
  - trimToSize
```
public void trimToSize()
```
    Description copied from class: AbstractMatrix
    
    Releases any superfluous internal memory. An application can use this operation to minimize the storage of the receiver.
    This default implementation does nothing. Override this method if necessary.
    
    Overrides:
    
    trimToSize in class AbstractMatrix

Class SparseRCObjectMatrix2D

Constructor Summary

Method Summary

Methods inherited from class cern.colt.matrix.tobject.impl.WrapperObjectMatrix2D

Methods inherited from class cern.colt.matrix.tobject.ObjectMatrix2D

Methods inherited from class cern.colt.matrix.AbstractMatrix2D

Methods inherited from class cern.colt.matrix.AbstractMatrix

Methods inherited from class cern.colt.PersistentObject

Methods inherited from class java.lang.Object

Constructor Detail

SparseRCObjectMatrix2D

SparseRCObjectMatrix2D

SparseRCObjectMatrix2D

SparseRCObjectMatrix2D

SparseRCObjectMatrix2D

SparseRCObjectMatrix2D

Method Detail

assign

assign

assign

cardinality

forEachNonZero

getColumnCompressed

getColumnIndexes

getDense

getQuick

getRowPointers

getTranspose

getValues

hasColumnIndexesSorted

like

like1D

removeZeroes

setQuick

sortColumnIndexes

toString

trimToSize